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PHOREST: a web-based tool for comparative analyses of expressed sequence tag data

Author:
  • Dag Ahrén
  • Carl Troein
  • Tomas Johansson
  • Anders Tunlid
Publishing year: 2004
Language: English
Pages: 311-314
Publication/Series: Molecular Ecology Notes
Volume: 4
Issue: 2
Document type: Journal article
Publisher: Wiley-Blackwell

Abstract english

Comparative analysis of expressed sequence tags is becoming an important tool in molecular ecology for comparing gene expression in organisms grown in certain environments. Additionally, expressed sequence tag database information can be used for the construction of DNA microarrays and for the detection of single nucleotide polymorphisms. For such applications, we present PHOREST, a web-based tool for managing, analysing and comparing various collections of expressed sequence tags. It is written in PHP (PHP: Hypertext Preprocessor) and runs on UNIX, Microsoft Windows and Macintosh (Mac OS X) platforms.

Keywords

  • Biophysics
  • Biological Sciences

Other

Published
  • Microbial Ecology
  • ISSN: 1471-8278
Tomas Johansson
E-mail: tomas [dot] johansson [at] biol [dot] lu [dot] se

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