Lund University is celebrating 350 years. Read more on lunduniversity.lu.se

Menu

Javascript is not activated in your browser. This website needs javascript activated to work properly.
You are here

PYTHON Bioinformatics programming - 21-25 Nov 2016

Course description: A need for basic programming skills is often identified in research projects where huge amounts of data is produced. This “crash course” will provide students with no programming experience with these skills. We will use Python as programming language and apply it on high throughput sequencing data (in this case, data generated with the Illumina sequencing platform as well as other biological data). However, other applications where programming is needed may be covered, if requested. Participants are kindly requested to bring their own computers. The computer has to be installed with a Unix based operating system (like any Linux distribution or Mac OS X). Maximum number of participants is ten. Former experience is neither required nor expected.

Course content:
Day 1. Get familiar with the Unix system. Simple shell scripting.
Day 2. Arithmetics and working with files.
Day 3. Strings and regular expressions.
Day 4. Arrays and dictionaries.
Day 5. Practice.

Course organizer:
Björn Canbäck
Department of Biology
Lund University

Where: Dept of Biology, Lund (details to come)
Cost: Geneco student: free; others: 1,500 SEK

More information:
Björn Canbäck
Tel: +46 (0)730 22 62 50
E-mail: Bjorn.Canback [at] biol.lu.se

Apply latest 21 October via email to Björn Canbäck.

Contact

General questions

Helena Westerdahl
Associate professor
MEMEG

Telephone: +46 46 222 36 69
E-mail: Helena.Westerdahl [at] biol.lu.se

Questions regarding GENECO courses

Bengt Hansson
Associate professor
MEMEG

Telephone: +46 46222 49 96
E-mail: Bengt.Hansson [at] biol.lu.se

Questions regarding administration, economy and other practical issues

Christina Rengefors
Project assistant
Department of Biology

Telephone: +46 46 222 96 14
E-mail: Christina.Rengefors [at] biol.lu.se